BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039B06SP1|AL430656
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1134 1050 0.0
3x_Contig850 752 0.0
>3x_Contig1134
Length = 4452
Score = 1050 bits (529), Expect = 0.0
Identities = 544/547 (99%), Gaps = 2/547 (0%)
Strand = Plus / Minus
Query: 386 catgattagcttctgtttgcagttctttgaggaagcaccgatatgtctttgtgaacctta 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4452 catgattagcttctgtttgcagttctttgaggaagcaccgatatgtctttgtgaacctta 4393
Query: 446 gacatcaaacctattgcttggcatctcttaatagcctttgttagacgacgctggttctta 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4392 gacatcaaacctattgcttggcatctcttaatagcctttgttagacgacgctggttctta 4333
Query: 506 gccgataaaccagttacatctctgtgtaatattttacccgttgatgtcacaaatcttgac 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4332 gccgataaaccagttacatctctgtgtaatattttacccgttgatgtcacaaatcttgac 4273
Query: 566 aagaactctgggttggtgtataaatcaagtggattgatcttcaatttgttgaatgggtca 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4272 aagaactctgggttggtgtataaatcaagtggattgatcttcaatttgttgaatgggtca 4213
Query: 626 aacgatccaggacgtaccccaaacttcttatctaaatgtattctttctaaggagaaatca 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4212 aacgatccaggacgtaccccaaacttcttatctaaatgtattctttctaaggagaaatca 4153
Query: 686 aatggattgtaaacggagcccggctgaaagtttttgattaacttggattctagcttcttg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4152 aatggattgtaaacggagcccggctgaaagtttttgattaacttggattctagcttcttg 4093
Query: 746 attgtgggcttgctattagcttccgacataccttctttcagaagtttttggtcaagactg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 attgtgggcttgctattagcttccgacataccttctttcagaagtttttggtcaagactg 4033
Query: 806 ttgcagacatatcttgtggtagaaaagaatcttgcgca-stgcggggaaaacatttcttc 864
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 4032 ttgcagacatatcttgtggtagaaaagaatcttgcgcagctgc-gggaaaacatttcttc 3974
Query: 865 tgatgtgttttaatttattcaatctctcgttaacaggcgtagaaaggcccgagcgacttg 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3973 tgatgtgttttaatttattcaatctctcgttaacaggcgtagaaaggcccgagcgacttg 3914
Query: 925 gttgttt 931
|||||||
Sbjct: 3913 gttgttt 3907
>3x_Contig850
Length = 2234
Score = 752 bits (379), Expect = 0.0
Identities = 379/379 (100%)
Strand = Plus / Plus
Query: 1 atccacaggtagaagaccgagtctttgattattctttttccacaacggtgaaggaagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 atccacaggtagaagaccgagtctttgattattctttttccacaacggtgaaggaagaga 1912
Query: 61 aggacagcggtatgagcgattatgttttacctggtcaagaagtccaaaacgttgcaggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 aggacagcggtatgagcgattatgttttacctggtcaagaagtccaaaacgttgcaggta 1972
Query: 121 tgggattcggacttccaatgtgcaaagcgtacctagagttgttcaatggtacacttgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 tgggattcggacttccaatgtgcaaagcgtacctagagttgttcaatggtacacttgaca 2032
Query: 181 ttcagtcattgtggggatggggtactgatgtttatatacgattgcacggtccatcggata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 ttcagtcattgtggggatggggtactgatgtttatatacgattgcacggtccatcggata 2092
Query: 241 gactattcgacaaatgagaacactgtactatcattcagtcccggagctttccattgcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 gactattcgacaaatgagaacactgtactatcattcagtcccggagctttccattgcaac 2152
Query: 301 gtgtttatactgttagcgctatttacagatataatcctatttattgagaaacatatattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 gtgtttatactgttagcgctatttacagatataatcctatttattgagaaacatatattc 2212
Query: 361 atatatacaagaagttatc 379
|||||||||||||||||||
Sbjct: 2213 atatatacaagaagttatc 2231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6864
Number of Sequences: 1807
Number of extensions: 6864
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)